Small update, I've moved the controller into a side pocket of my rack bag and it seems to run a bit cooler than before in the padded section plus I've made up this 3s+4s = 7s balancer lead so I can balance charge each battery pack pair...seems to work OK and I've not blown anything up...yet
Well thats not strictly true....I had my first puncture today...the rear inner tube exploded! Strangely just as the odometer had gone past 100 miles
Anyhow, I was only traveling at 14mph or so down hill and there was a very loud bang followed by an emergency stop. So I had to perform my first road side repair, just as well I had remembered a 21mm spanner for the axle nuts and some tie wraps for the wires. Took about 15~20mins to put in an old spare tube I carry that has a Presta valve not a Schrader so it would only be a temporary get-you-home measure.
I stopped of at my local independent BS and showed the blown inner tube with new 4" split, seems I may have pinched it putting the Marathon Plus tyre on but I'm sure I checked it properly...he also said the inner tube was too big so supplied me with a Schwalbe AV17 which does fit better.... and I was told to use some proper wheel rim tape
Lesson learnt, the bike is now back together and I hope it doesn't happen again!